nsv3231997
- Organism: Homo sapiens
- Study:nstd152 (Chaisson et al. 2019)
- Variant Type:sequence alteration
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:4
- Validation:Not tested
- Clinical Assertions: No
- Region Size:9,685
- Publication(s):Chaisson et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 610 SVs from 33 studies. See in: genome view
Overlapping variant regions from other studies: 611 SVs from 33 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3231997 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000023.11 | ChrX | 32,065,974 (-41, +41) | 32,075,658 (-41, +41) | ||
| nsv3231997 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 32,084,091 (-41, +41) | 32,093,775 (-41, +41) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv14351632 | sequence alteration | SAMN00006466 | Sequencing | Sequence alignment | Heterozygous | 14,137 |
| nssv14351633 | sequence alteration | HG00514 | Sequencing | Sequence alignment | Heterozygous | 39,861 |
| nssv14351634 | sequence alteration | SAMN00006579 | Sequencing | Sequence alignment | Heterozygous | 13,953 |
| nssv14351635 | sequence alteration | SAMN00006581 | Sequencing | Sequence alignment | Heterozygous | 41,185 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv14351632 | Submitted genomic | GRCh38 (hg38) | NC_000023.11 | ChrX | 32,065,974 (-41, +41) | 32,075,658 (-41, +41) | ||
| nssv14351633 | Submitted genomic | GRCh38 (hg38) | NC_000023.11 | ChrX | 32,065,974 (-41, +41) | 32,075,658 (-41, +41) | ||
| nssv14351634 | Submitted genomic | GRCh38 (hg38) | NC_000023.11 | ChrX | 32,065,974 (-41, +41) | 32,075,658 (-41, +41) | ||
| nssv14351635 | Submitted genomic | GRCh38 (hg38) | NC_000023.11 | ChrX | 32,065,974 (-41, +41) | 32,075,658 (-41, +41) | ||
| nssv14351632 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 32,084,091 (-41, +41) | 32,093,775 (-41, +41) |
| nssv14351633 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 32,084,091 (-41, +41) | 32,093,775 (-41, +41) |
| nssv14351634 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 32,084,091 (-41, +41) | 32,093,775 (-41, +41) |
| nssv14351635 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 32,084,091 (-41, +41) | 32,093,775 (-41, +41) |