nsv3235191
- Organism: Homo sapiens
- Study:nstd152 (Chaisson et al. 2019)
- Variant Type:sequence alteration
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:9
- Validation:Not tested
- Clinical Assertions: No
- Region Size:17,208
- Publication(s):Chaisson et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 365 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 354 SVs from 50 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3235191 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000008.11 | Chr8 | 144,185,655 (-41, +41) | 144,202,862 (-41, +41) | ||
| nsv3235191 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 145,240,558 (-41, +41) | 145,257,765 (-41, +41) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv14344386 | sequence alteration | HG00512 | Sequencing | Sequence alignment | Heterozygous | 13,827 |
| nssv14344387 | sequence alteration | SAMN00006466 | Sequencing | Sequence alignment | Heterozygous | 14,137 |
| nssv14344388 | sequence alteration | HG00514 | Sequencing | Sequence alignment | Heterozygous | 39,861 |
| nssv14344389 | sequence alteration | SAMN00006579 | Sequencing | Sequence alignment | Heterozygous | 13,953 |
| nssv14344390 | sequence alteration | SAMN00006580 | Sequencing | Sequence alignment | Heterozygous | 14,212 |
| nssv14344391 | sequence alteration | SAMN00006581 | Sequencing | Sequence alignment | Heterozygous | 41,185 |
| nssv14344392 | sequence alteration | SAMN00001694 | Sequencing | Sequence alignment | Heterozygous | 16,419 |
| nssv14344393 | sequence alteration | SAMN00001695 | Sequencing | Sequence alignment | Heterozygous | 15,732 |
| nssv14344394 | sequence alteration | SAMN00001696 | Sequencing | Sequence alignment | Heterozygous | 45,591 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv14344386 | Submitted genomic | GRCh38 (hg38) | NC_000008.11 | Chr8 | 144,185,655 (-41, +41) | 144,202,862 (-41, +41) | ||
| nssv14344387 | Submitted genomic | GRCh38 (hg38) | NC_000008.11 | Chr8 | 144,185,655 (-41, +41) | 144,202,862 (-41, +41) | ||
| nssv14344388 | Submitted genomic | GRCh38 (hg38) | NC_000008.11 | Chr8 | 144,185,655 (-41, +41) | 144,202,862 (-41, +41) | ||
| nssv14344389 | Submitted genomic | GRCh38 (hg38) | NC_000008.11 | Chr8 | 144,185,655 (-41, +41) | 144,202,862 (-41, +41) | ||
| nssv14344390 | Submitted genomic | GRCh38 (hg38) | NC_000008.11 | Chr8 | 144,185,655 (-41, +41) | 144,202,862 (-41, +41) | ||
| nssv14344391 | Submitted genomic | GRCh38 (hg38) | NC_000008.11 | Chr8 | 144,185,655 (-41, +41) | 144,202,862 (-41, +41) | ||
| nssv14344392 | Submitted genomic | GRCh38 (hg38) | NC_000008.11 | Chr8 | 144,185,655 (-41, +41) | 144,202,862 (-41, +41) | ||
| nssv14344393 | Submitted genomic | GRCh38 (hg38) | NC_000008.11 | Chr8 | 144,185,655 (-41, +41) | 144,202,862 (-41, +41) | ||
| nssv14344394 | Submitted genomic | GRCh38 (hg38) | NC_000008.11 | Chr8 | 144,185,655 (-41, +41) | 144,202,862 (-41, +41) | ||
| nssv14344386 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 145,240,558 (-41, +41) | 145,257,765 (-41, +41) |
| nssv14344387 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 145,240,558 (-41, +41) | 145,257,765 (-41, +41) |
| nssv14344388 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 145,240,558 (-41, +41) | 145,257,765 (-41, +41) |
| nssv14344389 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 145,240,558 (-41, +41) | 145,257,765 (-41, +41) |
| nssv14344390 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 145,240,558 (-41, +41) | 145,257,765 (-41, +41) |
| nssv14344391 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 145,240,558 (-41, +41) | 145,257,765 (-41, +41) |
| nssv14344392 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 145,240,558 (-41, +41) | 145,257,765 (-41, +41) |
| nssv14344393 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 145,240,558 (-41, +41) | 145,257,765 (-41, +41) |
| nssv14344394 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 145,240,558 (-41, +41) | 145,257,765 (-41, +41) |