nsv3237055
- Organism: Homo sapiens
- Study:nstd152 (Chaisson et al. 2019)
- Variant Type:sequence alteration
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:4
- Validation:Not tested
- Clinical Assertions: No
- Region Size:8,530
- Publication(s):Chaisson et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 119 SVs from 33 studies. See in: genome view
Overlapping variant regions from other studies: 119 SVs from 33 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3237055 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000006.12 | Chr6 | 69,137,588 (-41, +41) | 69,146,117 (-41, +41) | ||
nsv3237055 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 69,847,480 (-41, +41) | 69,856,009 (-41, +41) |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
---|---|---|---|---|---|---|
nssv14328586 | sequence alteration | SAMN00006466 | Sequencing | Sequence alignment | Heterozygous | 14,137 |
nssv14328587 | sequence alteration | SAMN00006579 | Sequencing | Sequence alignment | Heterozygous | 13,953 |
nssv14328588 | sequence alteration | SAMN00006580 | Sequencing | Sequence alignment | Heterozygous | 14,212 |
nssv14328589 | sequence alteration | SAMN00006581 | Sequencing | Sequence alignment | Heterozygous | 41,185 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|
nssv14328586 | Submitted genomic | GRCh38 (hg38) | NC_000006.12 | Chr6 | 69,137,588 (-41, +41) | 69,146,117 (-41, +41) | ||
nssv14328587 | Submitted genomic | GRCh38 (hg38) | NC_000006.12 | Chr6 | 69,137,588 (-41, +41) | 69,146,117 (-41, +41) | ||
nssv14328588 | Submitted genomic | GRCh38 (hg38) | NC_000006.12 | Chr6 | 69,137,588 (-41, +41) | 69,146,117 (-41, +41) | ||
nssv14328589 | Submitted genomic | GRCh38 (hg38) | NC_000006.12 | Chr6 | 69,137,588 (-41, +41) | 69,146,117 (-41, +41) | ||
nssv14328586 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 69,847,480 (-41, +41) | 69,856,009 (-41, +41) |
nssv14328587 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 69,847,480 (-41, +41) | 69,856,009 (-41, +41) |
nssv14328588 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 69,847,480 (-41, +41) | 69,856,009 (-41, +41) |
nssv14328589 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 69,847,480 (-41, +41) | 69,856,009 (-41, +41) |