nsv3241058
- Organism: Homo sapiens
- Study:nstd152 (Chaisson et al. 2019)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:37,617
- Publication(s):Chaisson et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 226 SVs from 42 studies. See in: genome view
Overlapping variant regions from other studies: 227 SVs from 42 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3241058 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000015.10 | Chr15 | 83,827,838 (-15, +15) | 83,865,454 (-15, +15) | ||
| nsv3241058 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 84,496,590 (-15, +15) | 84,534,206 (-15, +15) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv14380951 | inversion | SAMN00001694 | Sequencing | Sequence alignment | Heterozygous | 16,419 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14380951 | Submitted genomic | NC_000015.10:g.(83 827823_83827853)_( 83865439_83865469) inv37616 | GRCh38 (hg38) | NC_000015.10 | Chr15 | 83,827,838 (-15, +15) | 83,865,454 (-15, +15) | ||
| nssv14380951 | Remapped | Perfect | NC_000015.9:g.(844 96575_84496605)_(8 4534191_84534221)i nv37616 | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 84,496,590 (-15, +15) | 84,534,206 (-15, +15) |