nsv3242740
- Organism: Homo sapiens
- Study:nstd152 (Chaisson et al. 2019)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:79,010
- Publication(s):Chaisson et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 365 SVs from 54 studies. See in: genome view
Overlapping variant regions from other studies: 365 SVs from 54 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3242740 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000009.12 | Chr9 | 102,012,945 (-15, +15) | 102,091,954 (-15, +15) | ||
| nsv3242740 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 104,775,227 (-15, +15) | 104,854,236 (-15, +15) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv14349785 | inversion | SAMN00006579 | Sequencing | Sequence alignment | Heterozygous | 13,953 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14349785 | Submitted genomic | NC_000009.12:g.(10 2012930_102012960) _(102091939_102091 969)inv79009 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 102,012,945 (-15, +15) | 102,091,954 (-15, +15) | ||
| nssv14349785 | Remapped | Perfect | NC_000009.11:g.(10 4775212_104775242) _(104854221_104854 251)inv79009 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 104,775,227 (-15, +15) | 104,854,236 (-15, +15) |