nsv3245250
- Organism: Homo sapiens
- Study:nstd152 (Chaisson et al. 2019)
- Variant Type:sequence alteration
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:8
- Validation:Not tested
- Clinical Assertions: No
- Region Size:8,473
- Publication(s):Chaisson et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 225 SVs from 43 studies. See in: genome view
Overlapping variant regions from other studies: 225 SVs from 43 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3245250 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000006.12 | Chr6 | 166,031,004 (-41, +41) | 166,039,476 (-41, +41) | ||
nsv3245250 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 166,444,492 (-41, +41) | 166,452,964 (-41, +41) |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
---|---|---|---|---|---|---|
nssv14332129 | sequence alteration | HG00512 | Sequencing | Sequence alignment | Heterozygous | 13,827 |
nssv14332130 | sequence alteration | SAMN00006466 | Sequencing | Sequence alignment | Heterozygous | 14,137 |
nssv14332131 | sequence alteration | HG00514 | Sequencing | Sequence alignment | Heterozygous | 39,861 |
nssv14332132 | sequence alteration | SAMN00006579 | Sequencing | Sequence alignment | Heterozygous | 13,953 |
nssv14332133 | sequence alteration | SAMN00006580 | Sequencing | Sequence alignment | Heterozygous | 14,212 |
nssv14332134 | sequence alteration | SAMN00006581 | Sequencing | Sequence alignment | Heterozygous | 41,185 |
nssv14332135 | sequence alteration | SAMN00001694 | Sequencing | Sequence alignment | Heterozygous | 16,419 |
nssv14332136 | sequence alteration | SAMN00001696 | Sequencing | Sequence alignment | Heterozygous | 45,591 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|
nssv14332129 | Submitted genomic | GRCh38 (hg38) | NC_000006.12 | Chr6 | 166,031,004 (-41, +41) | 166,039,476 (-41, +41) | ||
nssv14332130 | Submitted genomic | GRCh38 (hg38) | NC_000006.12 | Chr6 | 166,031,004 (-41, +41) | 166,039,476 (-41, +41) | ||
nssv14332131 | Submitted genomic | GRCh38 (hg38) | NC_000006.12 | Chr6 | 166,031,004 (-41, +41) | 166,039,476 (-41, +41) | ||
nssv14332132 | Submitted genomic | GRCh38 (hg38) | NC_000006.12 | Chr6 | 166,031,004 (-41, +41) | 166,039,476 (-41, +41) | ||
nssv14332133 | Submitted genomic | GRCh38 (hg38) | NC_000006.12 | Chr6 | 166,031,004 (-41, +41) | 166,039,476 (-41, +41) | ||
nssv14332134 | Submitted genomic | GRCh38 (hg38) | NC_000006.12 | Chr6 | 166,031,004 (-41, +41) | 166,039,476 (-41, +41) | ||
nssv14332135 | Submitted genomic | GRCh38 (hg38) | NC_000006.12 | Chr6 | 166,031,004 (-41, +41) | 166,039,476 (-41, +41) | ||
nssv14332136 | Submitted genomic | GRCh38 (hg38) | NC_000006.12 | Chr6 | 166,031,004 (-41, +41) | 166,039,476 (-41, +41) | ||
nssv14332129 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 166,444,492 (-41, +41) | 166,452,964 (-41, +41) |
nssv14332130 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 166,444,492 (-41, +41) | 166,452,964 (-41, +41) |
nssv14332131 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 166,444,492 (-41, +41) | 166,452,964 (-41, +41) |
nssv14332132 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 166,444,492 (-41, +41) | 166,452,964 (-41, +41) |
nssv14332133 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 166,444,492 (-41, +41) | 166,452,964 (-41, +41) |
nssv14332134 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 166,444,492 (-41, +41) | 166,452,964 (-41, +41) |
nssv14332135 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 166,444,492 (-41, +41) | 166,452,964 (-41, +41) |
nssv14332136 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 166,444,492 (-41, +41) | 166,452,964 (-41, +41) |