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dbVar

Database of genomic structural variation

nsv3318204

Organism: Homo sapiens

Study:nstd157 (Frenkel et al. 2019)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:71,308

Publication(s):Frenkel et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 377 SVs from 68 studies. See in: genome view

Remapped(Score: Perfect):37,746,927-37,818,234

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3318204	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	37,746,927	37,818,234
nsv3318204	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	37,768,477	37,839,784

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14470464	copy number gain	M2342	SNP array	SNP genotyping analysis	13
nssv14471146	copy number gain	M2418	SNP array	SNP genotyping analysis	18

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv14470464	Remapped	Perfect	NC_000011.10:g.(?_ 37746927)_(3781823 4_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	37,746,927	37,818,234
nssv14471146	Remapped	Perfect	NC_000011.10:g.(?_ 37746927)_(3781823 4_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	37,746,927	37,818,234
nssv14470464	Submitted genomic		NC_000011.9:g.(?_3 7768477)_(37839784 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	37,768,477	37,839,784
nssv14471146	Submitted genomic		NC_000011.9:g.(?_3 7768477)_(37839784 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	37,768,477	37,839,784

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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