nsv3368405
- Organism: Homo sapiens
- Study:nstd162 (Audano et al. 2019)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Audano et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 146 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 146 SVs from 28 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3368405 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000002.12 | Chr2 | 192,131,205 | 192,131,205 | ||
nsv3368405 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000002.11 | Chr2 | 192,995,931 | 192,995,931 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv14648186 | herv insertion | SAMN03838746 | Sequencing | de novo and local sequence assembly | 26,336 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv14648186 | Submitted genomic | NC_000002.12:g.192 131205_192131206in s61 | GRCh38 (hg38) | NC_000002.12 | Chr2 | 192,131,205 | 192,131,205 | ||
nssv14648186 | Remapped | Perfect | NC_000002.11:g.192 995931_192995932in s61NC_000002.11:g. 192995931_19299593 2ins61 | GRCh37.p13 | First Pass | NC_000002.11 | Chr2 | 192,995,931 | 192,995,931 |