nsv3389713
- Organism: Homo sapiens
- Study:nstd162 (Audano et al. 2019)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:14
- Validation:Not tested
- Clinical Assertions: No
- Region Size:5,244
- Publication(s):Audano et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 159 SVs from 42 studies. See in: genome view
Overlapping variant regions from other studies: 159 SVs from 42 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3389713 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nsv3389713 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14753534 | inversion | SAMN04229548 | Sequencing | de novo and local sequence assembly | 23,009 |
| nssv14754836 | inversion | SAMN04251426 | Sequencing | de novo and local sequence assembly | 22,074 |
| nssv14755431 | inversion | SAMN05181962 | Sequencing | de novo and local sequence assembly | 23,563 |
| nssv14757445 | inversion | SAMN09690649 | Sequencing | de novo and local sequence assembly | 21,495 |
| nssv14760562 | inversion | SAMN02744161 | Sequencing | de novo and local sequence assembly | 20,941 |
| nssv14763274 | inversion | SAMN05603729 | Sequencing | de novo and local sequence assembly | 24,108 |
| nssv14763557 | inversion | SAMN03255769 | Sequencing | de novo and local sequence assembly | 21,134 |
| nssv14766371 | inversion | SAMN05603847 | Sequencing | de novo and local sequence assembly | 26,021 |
| nssv14766703 | inversion | SAMN06885952 | Sequencing | de novo and local sequence assembly | 28,070 |
| nssv14767135 | inversion | SAMN03838746 | Sequencing | de novo and local sequence assembly | 26,336 |
| nssv14768757 | inversion | SAMN04229552 | Sequencing | de novo and local sequence assembly | 24,632 |
| nssv14769486 | inversion | SAMN05603745 | Sequencing | de novo and local sequence assembly | 27,447 |
| nssv14770209 | inversion | SAMN09643900 | Sequencing | de novo and local sequence assembly | 26,631 |
| nssv14770502 | inversion | SAMN09651199 | Sequencing | de novo and local sequence assembly | 27,381 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14753534 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14754836 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14755431 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14757445 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14760562 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14763274 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14763557 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14766371 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14766703 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14767135 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14768757 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14769486 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14770209 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14770502 | Submitted genomic | NC_000007.14:g.107 418043_107423286in v | GRCh38 (hg38) | NC_000007.14 | Chr7 | 107,418,043 | 107,423,286 | ||
| nssv14753534 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
| nssv14754836 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
| nssv14755431 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
| nssv14757445 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
| nssv14760562 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
| nssv14763274 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
| nssv14763557 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
| nssv14766371 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
| nssv14766703 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
| nssv14767135 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
| nssv14768757 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
| nssv14769486 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
| nssv14770209 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |
| nssv14770502 | Remapped | Perfect | NC_000007.13:g.107 058488_107063731in vNC_000007.13:g.10 7058488_107063731i nv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 107,058,488 | 107,063,731 |