nsv3401417
- Organism: Homo sapiens
- Study:nstd162 (Audano et al. 2019)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Audano et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 211 SVs from 30 studies. See in: genome view
Overlapping variant regions from other studies: 211 SVs from 30 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3401417 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000007.14 | Chr7 | 148,311,328 | 148,311,328 | ||
nsv3401417 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 148,008,420 | 148,008,420 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv14766775 | herv insertion | SAMN03838746 | Sequencing | de novo and local sequence assembly | 26,336 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv14766775 | Submitted genomic | NC_000007.14:g.148 311328_148311329in s144 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 148,311,328 | 148,311,328 | ||
nssv14766775 | Remapped | Perfect | NC_000007.13:g.148 008420_148008421in s144NC_000007.13:g .148008420_1480084 21ins144 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 148,008,420 | 148,008,420 |