nsv3414083
- Organism: Homo sapiens
- Study:nstd162 (Audano et al. 2019)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Audano et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 383 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 383 SVs from 26 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3414083 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000023.11 | ChrX | 80,396,898 | 80,396,898 | ||
| nsv3414083 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 79,652,397 | 79,652,397 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14803473 | sva insertion | SAMN05603745 | Sequencing | de novo and local sequence assembly | 27,447 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14803473 | Submitted genomic | NC_000023.11:g.803 96898_80396899ins2 69 | GRCh38 (hg38) | NC_000023.11 | ChrX | 80,396,898 | 80,396,898 | ||
| nssv14803473 | Remapped | Perfect | NC_000023.10:g.796 52397_79652398ins2 69NC_000023.10:g.7 9652397_79652398in s269 | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 79,652,397 | 79,652,397 |