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dbVar

Database of genomic structural variation

nsv3414943

Organism: Homo sapiens

Study:nstd162 (Audano et al. 2019)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:6
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Audano et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 451 SVs from 22 studies. See in: genome view

Submitted genomic24,709,122-24,709,122

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3414943	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000023.11	ChrX	24,709,122	24,709,122
nsv3414943	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000023.10	ChrX	24,727,239	24,727,239

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14793938	sva insertion	SAMN09651199	Sequencing	de novo and local sequence assembly	27,381
nssv14798010	sva insertion	SAMN04229552	Sequencing	de novo and local sequence assembly	24,632
nssv14800874	sva insertion	SAMN04251426	Sequencing	de novo and local sequence assembly	22,074
nssv14801966	sva insertion	SAMN05603745	Sequencing	de novo and local sequence assembly	27,447
nssv14802800	sva insertion	SAMN09643900	Sequencing	de novo and local sequence assembly	26,631
nssv14811843	sva insertion	SAMN05603729	Sequencing	de novo and local sequence assembly	24,108

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14793938	Submitted genomic		NC_000023.11:g.247 09122_24709123ins1 26	GRCh38 (hg38)		NC_000023.11	ChrX	24,709,122	24,709,122
nssv14798010	Submitted genomic		NC_000023.11:g.247 09122_24709123ins1 26	GRCh38 (hg38)		NC_000023.11	ChrX	24,709,122	24,709,122
nssv14800874	Submitted genomic		NC_000023.11:g.247 09122_24709123ins1 26	GRCh38 (hg38)		NC_000023.11	ChrX	24,709,122	24,709,122
nssv14801966	Submitted genomic		NC_000023.11:g.247 09122_24709123ins1 26	GRCh38 (hg38)		NC_000023.11	ChrX	24,709,122	24,709,122
nssv14802800	Submitted genomic		NC_000023.11:g.247 09122_24709123ins1 26	GRCh38 (hg38)		NC_000023.11	ChrX	24,709,122	24,709,122
nssv14811843	Submitted genomic		NC_000023.11:g.247 09122_24709123ins1 26	GRCh38 (hg38)		NC_000023.11	ChrX	24,709,122	24,709,122
nssv14793938	Remapped	Perfect	NC_000023.10:g.247 27239_24727240ins1 26NC_000023.10:g.2 4727239_24727240in s126	GRCh37.p13	First Pass	NC_000023.10	ChrX	24,727,239	24,727,239
nssv14798010	Remapped	Perfect	NC_000023.10:g.247 27239_24727240ins1 26NC_000023.10:g.2 4727239_24727240in s126	GRCh37.p13	First Pass	NC_000023.10	ChrX	24,727,239	24,727,239
nssv14800874	Remapped	Perfect	NC_000023.10:g.247 27239_24727240ins1 26NC_000023.10:g.2 4727239_24727240in s126	GRCh37.p13	First Pass	NC_000023.10	ChrX	24,727,239	24,727,239
nssv14801966	Remapped	Perfect	NC_000023.10:g.247 27239_24727240ins1 26NC_000023.10:g.2 4727239_24727240in s126	GRCh37.p13	First Pass	NC_000023.10	ChrX	24,727,239	24,727,239
nssv14802800	Remapped	Perfect	NC_000023.10:g.247 27239_24727240ins1 26NC_000023.10:g.2 4727239_24727240in s126	GRCh37.p13	First Pass	NC_000023.10	ChrX	24,727,239	24,727,239
nssv14811843	Remapped	Perfect	NC_000023.10:g.247 27239_24727240ins1 26NC_000023.10:g.2 4727239_24727240in s126	GRCh37.p13	First Pass	NC_000023.10	ChrX	24,727,239	24,727,239

Showing 12 of 18

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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