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dbVar

Database of genomic structural variation

nsv3417960

Organism: Homo sapiens

Study:nstd162 (Audano et al. 2019)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Audano et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 456 SVs from 23 studies. See in: genome view

Submitted genomic139,662,308-139,662,308

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3417960	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000023.11	ChrX	139,662,308	139,662,308
nsv3417960	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000023.10	ChrX	138,744,467	138,744,467

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14792300	alu insertion	SAMN06885952	Sequencing	de novo and local sequence assembly	28,070

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14792300	Submitted genomic		NC_000023.11:g.139 662308_139662309in s312	GRCh38 (hg38)		NC_000023.11	ChrX	139,662,308	139,662,308
nssv14792300	Remapped	Perfect	NC_000023.10:g.138 744467_138744468in s312NC_000023.10:g .138744467_1387444 68ins312	GRCh37.p13	First Pass	NC_000023.10	ChrX	138,744,467	138,744,467

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No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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