nsv3418205

Organism: Homo sapiens

Study:nstd162 (Audano et al. 2019)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:11
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Audano et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 148 SVs from 27 studies. See in: genome view

Submitted genomic138,789,842-138,789,842

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3418205	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000007.14	Chr7	138,789,842	138,789,842
nsv3418205	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	138,474,587	138,474,587

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv14752576	alu insertion	SAMN09690649	Sequencing	de novo and local sequence assembly	21,495
nssv14755075	alu insertion	SAMN04251426	Sequencing	de novo and local sequence assembly	22,074
nssv14755525	alu insertion	SAMN05603745	Sequencing	de novo and local sequence assembly	27,447
nssv14760594	alu insertion	SAMN09643900	Sequencing	de novo and local sequence assembly	26,631
nssv14761643	alu insertion	SAMN09651199	Sequencing	de novo and local sequence assembly	27,381
nssv14764291	alu insertion	SAMN04229548	Sequencing	de novo and local sequence assembly	23,009
nssv14766911	alu insertion	SAMN05603847	Sequencing	de novo and local sequence assembly	26,021
nssv14767250	alu insertion	SAMN03838746	Sequencing	de novo and local sequence assembly	26,336
nssv14769860	alu insertion	SAMN05181962	Sequencing	de novo and local sequence assembly	23,563
nssv14771156	alu insertion	SAMN03255769	Sequencing	de novo and local sequence assembly	21,134
nssv14771415	alu insertion	SAMN06885952	Sequencing	de novo and local sequence assembly	28,070

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14752576	Submitted genomic		NC_000007.14:g.138 789842_138789843in s174	GRCh38 (hg38)		NC_000007.14	Chr7	138,789,842	138,789,842
nssv14755075	Submitted genomic		NC_000007.14:g.138 789842_138789843in s174	GRCh38 (hg38)		NC_000007.14	Chr7	138,789,842	138,789,842
nssv14755525	Submitted genomic		NC_000007.14:g.138 789842_138789843in s174	GRCh38 (hg38)		NC_000007.14	Chr7	138,789,842	138,789,842
nssv14760594	Submitted genomic		NC_000007.14:g.138 789842_138789843in s174	GRCh38 (hg38)		NC_000007.14	Chr7	138,789,842	138,789,842
nssv14761643	Submitted genomic		NC_000007.14:g.138 789842_138789843in s174	GRCh38 (hg38)		NC_000007.14	Chr7	138,789,842	138,789,842
nssv14764291	Submitted genomic		NC_000007.14:g.138 789842_138789843in s174	GRCh38 (hg38)		NC_000007.14	Chr7	138,789,842	138,789,842
nssv14766911	Submitted genomic		NC_000007.14:g.138 789842_138789843in s174	GRCh38 (hg38)		NC_000007.14	Chr7	138,789,842	138,789,842
nssv14767250	Submitted genomic		NC_000007.14:g.138 789842_138789843in s174	GRCh38 (hg38)		NC_000007.14	Chr7	138,789,842	138,789,842
nssv14769860	Submitted genomic		NC_000007.14:g.138 789842_138789843in s174	GRCh38 (hg38)		NC_000007.14	Chr7	138,789,842	138,789,842
nssv14771156	Submitted genomic		NC_000007.14:g.138 789842_138789843in s174	GRCh38 (hg38)		NC_000007.14	Chr7	138,789,842	138,789,842
nssv14771415	Submitted genomic		NC_000007.14:g.138 789842_138789843in s174	GRCh38 (hg38)		NC_000007.14	Chr7	138,789,842	138,789,842
nssv14752576	Remapped	Perfect	NC_000007.13:g.138 474587_138474588in s174NC_000007.13:g .138474587_1384745 88ins174	GRCh37.p13	First Pass	NC_000007.13	Chr7	138,474,587	138,474,587
nssv14755075	Remapped	Perfect	NC_000007.13:g.138 474587_138474588in s174NC_000007.13:g .138474587_1384745 88ins174	GRCh37.p13	First Pass	NC_000007.13	Chr7	138,474,587	138,474,587
nssv14755525	Remapped	Perfect	NC_000007.13:g.138 474587_138474588in s174NC_000007.13:g .138474587_1384745 88ins174	GRCh37.p13	First Pass	NC_000007.13	Chr7	138,474,587	138,474,587
nssv14760594	Remapped	Perfect	NC_000007.13:g.138 474587_138474588in s174NC_000007.13:g .138474587_1384745 88ins174	GRCh37.p13	First Pass	NC_000007.13	Chr7	138,474,587	138,474,587
nssv14761643	Remapped	Perfect	NC_000007.13:g.138 474587_138474588in s174NC_000007.13:g .138474587_1384745 88ins174	GRCh37.p13	First Pass	NC_000007.13	Chr7	138,474,587	138,474,587
nssv14764291	Remapped	Perfect	NC_000007.13:g.138 474587_138474588in s174NC_000007.13:g .138474587_1384745 88ins174	GRCh37.p13	First Pass	NC_000007.13	Chr7	138,474,587	138,474,587
nssv14766911	Remapped	Perfect	NC_000007.13:g.138 474587_138474588in s174NC_000007.13:g .138474587_1384745 88ins174	GRCh37.p13	First Pass	NC_000007.13	Chr7	138,474,587	138,474,587
nssv14767250	Remapped	Perfect	NC_000007.13:g.138 474587_138474588in s174NC_000007.13:g .138474587_1384745 88ins174	GRCh37.p13	First Pass	NC_000007.13	Chr7	138,474,587	138,474,587
nssv14769860	Remapped	Perfect	NC_000007.13:g.138 474587_138474588in s174NC_000007.13:g .138474587_1384745 88ins174	GRCh37.p13	First Pass	NC_000007.13	Chr7	138,474,587	138,474,587
nssv14771156	Remapped	Perfect	NC_000007.13:g.138 474587_138474588in s174NC_000007.13:g .138474587_1384745 88ins174	GRCh37.p13	First Pass	NC_000007.13	Chr7	138,474,587	138,474,587
nssv14771415	Remapped	Perfect	NC_000007.13:g.138 474587_138474588in s174NC_000007.13:g .138474587_1384745 88ins174	GRCh37.p13	First Pass	NC_000007.13	Chr7	138,474,587	138,474,587

Showing 22 of 33

dbVar

Database of genomic structural variation

nsv3418205

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant