nsv3418226
- Organism: Homo sapiens
- Study:nstd162 (Audano et al. 2019)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Audano et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3418226 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NT_187497.1 | Unplaced|N T_187497.1 | 98,907 | 98,907 | ||
nsv3418226 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | Second Pass | NT_167218.1 | Unplaced|N T_167218.1 | 156,985 | 156,985 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv14809556 | mobile element insertion | SAMN09651199 | Sequencing | de novo and local sequence assembly | 27,381 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv14809556 | Submitted genomic | NT_187497.1:g.9890 7_98908ins96 | GRCh38 (hg38) | NT_187497.1 | Unplaced|N T_187497.1 | 98,907 | 98,907 | ||
nssv14809556 | Remapped | Perfect | NT_167218.1:g.1569 85_156986ins96NT_1 67218.1:g.156985_1 56986ins96 | GRCh37.p13 | Second Pass | NT_167218.1 | Unplaced|N T_167218.1 | 156,985 | 156,985 |