nsv3418745
- Organism: Homo sapiens
- Study:nstd162 (Audano et al. 2019)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:14
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Audano et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 131 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 131 SVs from 40 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3418745 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nsv3418745 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14733501 | mobile element insertion | SAMN05181962 | Sequencing | de novo and local sequence assembly | 23,563 |
| nssv14733747 | mobile element insertion | SAMN06885952 | Sequencing | de novo and local sequence assembly | 28,070 |
| nssv14734108 | mobile element insertion | SAMN09690649 | Sequencing | de novo and local sequence assembly | 21,495 |
| nssv14736707 | mobile element insertion | SAMN03255769 | Sequencing | de novo and local sequence assembly | 21,134 |
| nssv14739118 | mobile element insertion | SAMN05603729 | Sequencing | de novo and local sequence assembly | 24,108 |
| nssv14740096 | mobile element insertion | SAMN05603745 | Sequencing | de novo and local sequence assembly | 27,447 |
| nssv14744778 | mobile element insertion | SAMN09643900 | Sequencing | de novo and local sequence assembly | 26,631 |
| nssv14745488 | mobile element insertion | SAMN04229548 | Sequencing | de novo and local sequence assembly | 23,009 |
| nssv14745899 | mobile element insertion | SAMN09651199 | Sequencing | de novo and local sequence assembly | 27,381 |
| nssv14746332 | mobile element insertion | SAMN04251426 | Sequencing | de novo and local sequence assembly | 22,074 |
| nssv14747045 | mobile element insertion | SAMN02744161 | Sequencing | de novo and local sequence assembly | 20,941 |
| nssv14748430 | mobile element insertion | SAMN03838746 | Sequencing | de novo and local sequence assembly | 26,336 |
| nssv14749411 | mobile element insertion | SAMN05603847 | Sequencing | de novo and local sequence assembly | 26,021 |
| nssv14750696 | mobile element insertion | SAMN04229552 | Sequencing | de novo and local sequence assembly | 24,632 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14733501 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14733747 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14734108 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14736707 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14739118 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14740096 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14744778 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14745488 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14745899 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14746332 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14747045 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14748430 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14749411 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14750696 | Submitted genomic | NC_000007.14:g.842 99806_84299807ins6 9 | GRCh38 (hg38) | NC_000007.14 | Chr7 | 84,299,806 | 84,299,806 | ||
| nssv14733501 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
| nssv14733747 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
| nssv14734108 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
| nssv14736707 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
| nssv14739118 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
| nssv14740096 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
| nssv14744778 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
| nssv14745488 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
| nssv14745899 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
| nssv14746332 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
| nssv14747045 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
| nssv14748430 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
| nssv14749411 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |
| nssv14750696 | Remapped | Perfect | NC_000007.13:g.839 29122_83929123ins6 9NC_000007.13:g.83 929122_83929123ins 69 | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 83,929,122 | 83,929,122 |