nsv3418825
- Organism: Homo sapiens
- Study:nstd164 (Karolak et al. 2019)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,006,582
- Publication(s):Karolak et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 5107 SVs from 97 studies. See in: genome view
Overlapping variant regions from other studies: 5107 SVs from 97 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3418825 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 60,090,124 | 62,096,705 |
| nsv3418825 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 58,167,485 | 60,174,066 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis |
|---|---|---|---|---|
| nssv14814879 | copy number loss | P019 | Oligo aCGH | Curated |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14814879 | Remapped | Perfect | NC_000017.11:g.(?_ 60090124)_(6209670 5_?)del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 60,090,124 | 62,096,705 |
| nssv14814879 | Submitted genomic | NC_000017.10:g.(?_ 58167485)_(6017406 6_?)del | GRCh37 (hg19) | NC_000017.10 | Chr17 | 58,167,485 | 60,174,066 |