nsv3535956
- Organism: Homo sapiens
- Study:nstd152 (Chaisson et al. 2019)
- Variant Type:mobile element insertion
- Method Type:Optical mapping, Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Description:Insertion of a HERV mobile element relative to the reference
- Publication(s):Chaisson et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 362 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 362 SVs from 26 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3535956 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000023.11 | ChrX | 71,500,345 | 71,500,345 | ||
nsv3535956 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 70,720,195 | 70,720,195 |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv14430778 | Submitted genomic | NC_000023.11:g.715 00345_71500346ins3 09 | GRCh38 (hg38) | NC_000023.11 | ChrX | 71,500,345 | 71,500,345 | ||
nssv14430778 | Remapped | Perfect | NC_000023.10:g.707 20195_70720196ins3 09 | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 70,720,195 | 70,720,195 |