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dbVar

Database of genomic structural variation

nsv3544761

Organism: Homo sapiens

Study:nstd152 (Chaisson et al. 2019)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:9
Validation:Not tested
Clinical Assertions: No
Region Size:42,329

Publication(s):Chaisson et al. 2019

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 606 SVs from 71 studies. See in: genome view

Submitted genomic247,128,048-247,170,396

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3544761	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	247,128,053 (-5, +0)	247,170,381 (-15, +15)
nsv3544761	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	247,291,355 (-5, +0)	247,333,683 (-15, +15)

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Zygosity	Other Calls in this Sample and Study
nssv14321582	inversion	HG00512	Sequencing	Sequence alignment	Heterozygous	13,827
nssv14321583	inversion	SAMN00006466	Sequencing	Sequence alignment	Heterozygous	14,137
nssv14321584	inversion	HG00514	Sequencing	Sequence alignment	Heterozygous	39,861
nssv14321585	inversion	SAMN00006579	Sequencing	Sequence alignment	Heterozygous	13,953
nssv14321586	inversion	SAMN00006580	Sequencing	Sequence alignment	Heterozygous	14,212
nssv14321587	inversion	SAMN00006581	Sequencing	Sequence alignment	Heterozygous	41,185
nssv14321588	inversion	SAMN00001694	Sequencing	Sequence alignment	Heterozygous	16,419
nssv14321589	inversion	SAMN00001695	Sequencing	Sequence alignment	Heterozygous	15,732
nssv14321590	inversion	SAMN00001696	Sequencing	Sequence alignment	Heterozygous	45,591

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv14321582	Submitted genomic		NC_000001.11:g.(24 7128048_247128053) _(247170366_247170 396)inv42328	GRCh38 (hg38)		NC_000001.11	Chr1	247,128,053 (-5, +0)	247,170,381 (-15, +15)
nssv14321583	Submitted genomic		NC_000001.11:g.(24 7128048_247128053) _(247170366_247170 396)inv42328	GRCh38 (hg38)		NC_000001.11	Chr1	247,128,053 (-5, +0)	247,170,381 (-15, +15)
nssv14321584	Submitted genomic		NC_000001.11:g.(24 7128048_247128053) _(247170366_247170 396)inv42328	GRCh38 (hg38)		NC_000001.11	Chr1	247,128,053 (-5, +0)	247,170,381 (-15, +15)
nssv14321585	Submitted genomic		NC_000001.11:g.(24 7128048_247128053) _(247170366_247170 396)inv42328	GRCh38 (hg38)		NC_000001.11	Chr1	247,128,053 (-5, +0)	247,170,381 (-15, +15)
nssv14321586	Submitted genomic		NC_000001.11:g.(24 7128048_247128053) _(247170366_247170 396)inv42328	GRCh38 (hg38)		NC_000001.11	Chr1	247,128,053 (-5, +0)	247,170,381 (-15, +15)
nssv14321587	Submitted genomic		NC_000001.11:g.(24 7128048_247128053) _(247170366_247170 396)inv42328	GRCh38 (hg38)		NC_000001.11	Chr1	247,128,053 (-5, +0)	247,170,381 (-15, +15)
nssv14321588	Submitted genomic		NC_000001.11:g.(24 7128048_247128053) _(247170366_247170 396)inv42328	GRCh38 (hg38)		NC_000001.11	Chr1	247,128,053 (-5, +0)	247,170,381 (-15, +15)
nssv14321589	Submitted genomic		NC_000001.11:g.(24 7128048_247128053) _(247170366_247170 396)inv42328	GRCh38 (hg38)		NC_000001.11	Chr1	247,128,053 (-5, +0)	247,170,381 (-15, +15)
nssv14321590	Submitted genomic		NC_000001.11:g.(24 7128048_247128053) _(247170366_247170 396)inv42328	GRCh38 (hg38)		NC_000001.11	Chr1	247,128,053 (-5, +0)	247,170,381 (-15, +15)
nssv14321582	Remapped	Perfect	NC_000001.10:g.(24 7291350_247291355) _(247333668_247333 698)inv42328	GRCh37.p13	First Pass	NC_000001.10	Chr1	247,291,355 (-5, +0)	247,333,683 (-15, +15)
nssv14321583	Remapped	Perfect	NC_000001.10:g.(24 7291350_247291355) _(247333668_247333 698)inv42328	GRCh37.p13	First Pass	NC_000001.10	Chr1	247,291,355 (-5, +0)	247,333,683 (-15, +15)
nssv14321584	Remapped	Perfect	NC_000001.10:g.(24 7291350_247291355) _(247333668_247333 698)inv42328	GRCh37.p13	First Pass	NC_000001.10	Chr1	247,291,355 (-5, +0)	247,333,683 (-15, +15)
nssv14321585	Remapped	Perfect	NC_000001.10:g.(24 7291350_247291355) _(247333668_247333 698)inv42328	GRCh37.p13	First Pass	NC_000001.10	Chr1	247,291,355 (-5, +0)	247,333,683 (-15, +15)
nssv14321586	Remapped	Perfect	NC_000001.10:g.(24 7291350_247291355) _(247333668_247333 698)inv42328	GRCh37.p13	First Pass	NC_000001.10	Chr1	247,291,355 (-5, +0)	247,333,683 (-15, +15)
nssv14321587	Remapped	Perfect	NC_000001.10:g.(24 7291350_247291355) _(247333668_247333 698)inv42328	GRCh37.p13	First Pass	NC_000001.10	Chr1	247,291,355 (-5, +0)	247,333,683 (-15, +15)
nssv14321588	Remapped	Perfect	NC_000001.10:g.(24 7291350_247291355) _(247333668_247333 698)inv42328	GRCh37.p13	First Pass	NC_000001.10	Chr1	247,291,355 (-5, +0)	247,333,683 (-15, +15)
nssv14321589	Remapped	Perfect	NC_000001.10:g.(24 7291350_247291355) _(247333668_247333 698)inv42328	GRCh37.p13	First Pass	NC_000001.10	Chr1	247,291,355 (-5, +0)	247,333,683 (-15, +15)
nssv14321590	Remapped	Perfect	NC_000001.10:g.(24 7291350_247291355) _(247333668_247333 698)inv42328	GRCh37.p13	First Pass	NC_000001.10	Chr1	247,291,355 (-5, +0)	247,333,683 (-15, +15)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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