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nsv3565874

  • Variant Calls:1
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:1
  • Description:Insertion of a SVA mobile element relative to the reference
  • Publication(s):Chaisson et al. 2019

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 303 SVs from 33 studies. See in: genome view    
Submitted genomic15,568,001-15,568,031Question Mark
Overlapping variant regions from other studies: 309 SVs from 33 studies. See in: genome view    
Remapped(Score: Perfect):15,567,999-15,568,029Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrStartStop
nsv3565874Submitted genomicGRCh38 (hg38)Primary AssemblyNC_000009.12Chr915,568,016 (-15, +15)15,568,016 (-15, +15)
nsv3565874RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000009.11Chr915,568,014 (-15, +15)15,568,014 (-15, +15)

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisZygosityOther Calls in this Sample and Study
nssv14345373sva insertionSAMN00006580SequencingSequence alignmentHeterozygous14,212

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrStartStop
nssv14345373Submitted genomicNC_000009.12:g.(15
568001_15568031)_(
15568001_15568031)
ins1240		GRCh38 (hg38)NC_000009.12Chr915,568,016 (-15, +15)15,568,016 (-15, +15)
nssv14345373RemappedPerfectNC_000009.11:g.(15
567999_15568029)_(
15567999_15568029)
ins1240		GRCh37.p13First PassNC_000009.11Chr915,568,014 (-15, +15)15,568,014 (-15, +15)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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