nsv3861
- Organism: Homo sapiens
- Study:nstd2 (Kidd et al. 2008)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:53,254
- Publication(s):Kidd et al. 2008
- TRACE: TEMPLATE_ID='1207854_ABC14_4_1_000000955614_K14'
- TRACE: TEMPLATE_ID='1207854_ABC14_4_1_000050967600_M22'
- TRACE: TEMPLATE_ID='1209408_ABC14_4_1_000050114400_M7'
- TRACE: TEMPLATE_ID='174222_ABC10_2_1_000044544500_G9'
- TRACE: TEMPLATE_ID='174552_ABC10_2_1_000044634000_I12'
- TRACE: TEMPLATE_ID='174552_ABC10_2_1_000044636900_O3'
- TRACE: TEMPLATE_ID='174552_ABC10_2_1_000044707900_B15'
- Overlapping Genes
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 201 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 201 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 8 SVs from 3 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3861 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 68,030,107 | 68,083,360 |
| nsv3861 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 68,079,257 | 68,132,510 |
| nsv3861 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000003.9 | Chr3 | 68,161,947 | 68,215,200 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv7821 | Remapped | Perfect | NC_000003.12:g.(68 030107_?)_(?_68063 644)ins5891 | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 68,030,107 | 68,063,644 |
| nssv306 | Remapped | Perfect | NC_000003.12:g.(68 048773_?)_(?_68083 360)ins6396 | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 68,048,773 | 68,083,360 |
| nssv7821 | Remapped | Perfect | NC_000003.11:g.(68 079257_?)_(?_68112 794)ins5891 | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 68,079,257 | 68,112,794 |
| nssv306 | Remapped | Perfect | NC_000003.11:g.(68 097923_?)_(?_68132 510)ins6396 | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 68,097,923 | 68,132,510 |
| nssv7821 | Submitted genomic | NC_000003.9:g.(681 61947_?)_(?_681954 84)ins5891 | NCBI35 (hg17) | NC_000003.9 | Chr3 | 68,161,947 | 68,195,484 | ||
| nssv306 | Submitted genomic | NC_000003.9:g.(681 80613_?)_(?_682152 00)ins6396 | NCBI35 (hg17) | NC_000003.9 | Chr3 | 68,180,613 | 68,215,200 |