nsv3885169
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:28,323,614
- Description:GRCh37/hg19 3p24.3-21.31(chr3:16923595-45249923)x2,3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 65321 SVs from 130 studies. See in: genome view
Overlapping variant regions from other studies: 65324 SVs from 130 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3885169 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 16,884,818 | 45,208,431 |
| nsv3885169 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 16,923,595 | 45,249,923 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv15152847 | copy number gain | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV000682249.1, VCV000562760.1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15152847 | Remapped | Good | NC_000003.12:g.(?_ 16884818)_(4520843 1_?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 16,884,818 | 45,208,431 |
| nssv15152847 | Submitted genomic | NC_000003.11:g.(?_ 16923595)_(4524992 3_?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 16,923,595 | 45,249,923 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv15152847 | GRCh37: NC_000003.11:g.(?_16923595)_(45249923_?)dup | copy number gain | germline | not provided | Pathogenic | ClinVar | RCV000682249.1, VCV000562760.1 |