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dbVar

Database of genomic structural variation

nsv3887184

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:304,378

Description:GRCh37/hg19 Xp21.1(chrX:32232129-32536506)x1 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 718 SVs from 61 studies. See in: genome view

Remapped(Score: Perfect):32,214,012-32,518,389

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3887184	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	32,214,012	32,518,389
nsv3887184	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	32,232,129	32,536,506

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15154305	copy number loss	Multiple	Multiple	not provided	not provided	ClinVar	RCV000709828.1, VCV000585230.1	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15154305	Remapped	Perfect	NC_000023.11:g.(?_ 32214012)_(3251838 9_?)del	GRCh38.p12	First Pass	NC_000023.11	ChrX	32,214,012	32,518,389
nssv15154305	Submitted genomic		NC_000023.10:g.(?_ 32232129)_(3253650 6_?)del	GRCh37 (hg19)		NC_000023.10	ChrX	32,232,129	32,536,506

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15154305	GRCh37: NC_000023.10:g.(?_32232129)_(32536506_?)del	copy number loss	unknown	not provided	not provided	ClinVar	RCV000709828.1, VCV000585230.1	1

No genotype data were submitted for this variant

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