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dbVar

Database of genomic structural variation

nsv3892460

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:1,681,268

Description:GRCh37/hg19 13q12.3-13.1(chr13:32178877-33860144)x0 AND Poly (ADP-Ribose) polymerase inhibitor response

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 4037 SVs from 104 studies. See in: genome view

Remapped(Score: Perfect):31,604,740-33,286,007

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv3892460	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000013.11	Chr13	31,604,740	33,286,007
nsv3892460	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000013.10	Chr13	32,178,877	33,860,144

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15126110	copy number loss	Multiple	Multiple	Poly (ADP-Ribose) polymerase inhibitor response	drug response	ClinVar	RCV000443876.1, VCV000377385.1	0

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv15126110	Remapped	Perfect	NC_000013.11:g.316 04740_33286007del	GRCh38.p12	First Pass	NC_000013.11	Chr13	31,604,740	33,286,007
nssv15126110	Submitted genomic		NC_000013.10:g.321 78877_33860144del	GRCh37 (hg19)		NC_000013.10	Chr13	32,178,877	33,860,144

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15126110	GRCh37: NC_000013.10:g.32178877_33860144del	copy number loss	somatic	Poly (ADP-Ribose) polymerase inhibitor response	drug response	ClinVar	RCV000443876.1, VCV000377385.1	0

No genotype data were submitted for this variant

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