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dbVar

Database of genomic structural variation

nsv3894347

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:16,840

Description:GRCh37/hg19 16q24.1(chr16:86519903-86536742)x3 AND See cases

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 125 SVs from 39 studies. See in: genome view

Remapped(Score: Perfect):86,486,297-86,503,136

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv3894347	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	86,486,297	86,503,136
nsv3894347	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	86,519,903	86,536,742

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15141362	copy number gain	Multiple	Multiple	See cases	Benign/Likely benign	ClinVar	RCV000449113.3, VCV000393935.3	3

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15141362	Remapped	Perfect	NC_000016.10:g.(?_ 86486297)_(8650313 6_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	86,486,297	86,503,136
nssv15141362	Submitted genomic		NC_000016.9:g.(?_8 6519903)_(86536742 _?)dup	GRCh37 (hg19)		NC_000016.9	Chr16	86,519,903	86,536,742

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15141362	GRCh37: NC_000016.9:g.(?_86519903)_(86536742_?)dup	copy number gain	not provided	See cases	Benign/Likely benign	ClinVar	RCV000449113.3, VCV000393935.3	3

No genotype data were submitted for this variant

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