nsv3894905
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:75,821
- Description:GRCh37/hg19 10q24.2(chr10:99476328-99552148)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 243 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 243 SVs from 48 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3894905 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 97,716,571 | 97,792,391 |
| nsv3894905 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 99,476,328 | 99,552,148 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15155334 | copy number loss | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV000683187.1, VCV000563698.1 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15155334 | Remapped | Perfect | NC_000010.11:g.(?_ 97716571)_(9779239 1_?)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 97,716,571 | 97,792,391 |
| nssv15155334 | Submitted genomic | NC_000010.10:g.(?_ 99476328)_(9955214 8_?)del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 99,476,328 | 99,552,148 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15155334 | GRCh37: NC_000010.10:g.(?_99476328)_(99552148_?)del | copy number loss | germline | not provided | Uncertain significance | ClinVar | RCV000683187.1, VCV000563698.1 | 1 |