nsv3896056
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:160,746
- Description:GRCh37/hg19 11q13.4(chr11:71118826-71279571)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 570 SVs from 66 studies. See in: genome view
Overlapping variant regions from other studies: 568 SVs from 66 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3896056 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 71,407,780 | 71,568,525 |
| nsv3896056 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 71,118,826 | 71,279,571 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15171575 | copy number gain | Multiple | Multiple | not provided | Benign | ClinVar | RCV000750109.2, VCV000613473.2 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15171575 | Remapped | Perfect | NC_000011.10:g.(?_ 71407780)_(7156852 5_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 71,407,780 | 71,568,525 |
| nssv15171575 | Submitted genomic | NC_000011.9:g.(?_7 1118826)_(71279571 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 71,118,826 | 71,279,571 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15171575 | GRCh37: NC_000011.9:g.(?_71118826)_(71279571_?)dup | copy number gain | unknown | not provided | Benign | ClinVar | RCV000750109.2, VCV000613473.2 | 3 |