nsv3897046
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:350,156
- Description:GRCh37/hg19 11q21(chr11:96458493-96808648)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1088 SVs from 76 studies. See in: genome view
Overlapping variant regions from other studies: 1089 SVs from 76 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3897046 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 96,587,493 | 96,937,648 |
| nsv3897046 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 96,458,493 | 96,808,648 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15151985 | copy number loss | Multiple | Multiple | not provided | Likely benign | ClinVar | RCV000659206.3, VCV000547121.3 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15151985 | Remapped | Perfect | NC_000011.10:g.(?_ 96587493)_(9693764 8_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 96,587,493 | 96,937,648 |
| nssv15151985 | Submitted genomic | NC_000011.9:g.(?_9 6458493)_(96808648 _?)del | GRCh37 (hg19) | NC_000011.9 | Chr11 | 96,458,493 | 96,808,648 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15151985 | GRCh37: NC_000011.9:g.(?_96458493)_(96808648_?)del | copy number loss | germline | not provided | Likely benign | ClinVar | RCV000659206.3, VCV000547121.3 | 1 |