nsv3900144
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:134,865,660
- Description:GRCh37/hg19 11p15.5-q25(chr11:198510-134934063)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 358723 SVs from 154 studies. See in: genome view
Overlapping variant regions from other studies: 358390 SVs from 154 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3900144 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 198,510 | 135,064,169 |
| nsv3900144 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 198,510 | 134,934,063 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15158476 | copy number gain | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV000737348.2, VCV000600712.2 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15158476 | Remapped | Good | NC_000011.10:g.(?_ 198510)_(135064169 _?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 198,510 | 135,064,169 |
| nssv15158476 | Submitted genomic | NC_000011.9:g.(?_1 98510)_(134934063_ ?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 198,510 | 134,934,063 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15158476 | GRCh37: NC_000011.9:g.(?_198510)_(134934063_?)dup | copy number gain | unknown | not provided | Pathogenic | ClinVar | RCV000737348.2, VCV000600712.2 | 3 |