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dbVar

Database of genomic structural variation

nsv3922157

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:NCBI36

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:70,208,316

Description:NCBI36/hg18 15q13.3-26.3(chr15:29852369-30302249)x3 AND See cases

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 186223 SVs from 151 studies. See in: genome view

Remapped(Score: Good):31,772,874-101,981,189

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop	Outer Stop
nsv3922157	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	31,772,874	101,981,189	101,981,189
nsv3922157	Remapped	Good	GRCh37.p13	Primary Assembly	First Pass	NC_000015.9	Chr15	32,065,077	102,521,392	102,521,392
nsv3922157	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000015.8	Chr15	29,852,369	30,302,249	100,338,915

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15125478	copy number gain	Multiple	Multiple	See cases	Uncertain significance	ClinVar	RCV000450456.2, VCV000398765.2	3

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop	Outer Stop
nssv15125478	Remapped	Good	NC_000015.10:g.(?_ 31772874)_(1019811 89_101981189)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	31,772,874	101,981,189	101,981,189
nssv15125478	Remapped	Good	NC_000015.9:g.(?_3 2065077)_(10252139 2_102521392)dup	GRCh37.p13	First Pass	NC_000015.9	Chr15	32,065,077	102,521,392	102,521,392
nssv15125478	Submitted genomic		NC_000015.8:g.(?_2 9852369)_(30302249 _100338915)dup	NCBI36 (hg18)		NC_000015.8	Chr15	29,852,369	30,302,249	100,338,915

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15125478	NCBI36: NC_000015.8:g.(?_29852369)_(30302249_100338915)dup	copy number gain	not provided	See cases	Uncertain significance	ClinVar	RCV000450456.2, VCV000398765.2	3

No genotype data were submitted for this variant

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