nsv3922550
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37, GRCh38, NCBI36
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:1,693,256
- Description:
GRCh38/hg38 19p13.3(chr19:259395-1952650)x3 AND See cases
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 13007 SVs from 111 studies. See in: genome view
Overlapping variant regions from other studies: 13007 SVs from 111 studies. See in: genome view
Overlapping variant regions from other studies: 3612 SVs from 29 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Assembly | Assembly Unit | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nsv3922550 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000019.10 | Chr19 | 259,395 | 1,952,650 |
| nsv3922550 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 259,395 | 1,952,649 |
| nsv3922550 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000019.8 | Chr19 | 210,395 | 1,903,649 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15132925 | copy number gain | Multiple | Multiple | See cases | Pathogenic | ClinVar | RCV000052875.6, VCV000059078.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | HGVS | Assembly | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|
| nssv15132925 | Submitted genomic | NC_000019.10:g.(?_ 259395)_(1952650_? )dup | GRCh38 (hg38) | NC_000019.10 | Chr19 | 259,395 | 1,952,650 |
| nssv15132925 | Submitted genomic | NC_000019.9:g.(?_2 59395)_(1952649_?) dup | GRCh37 (hg19) | NC_000019.9 | Chr19 | 259,395 | 1,952,649 |
| nssv15132925 | Submitted genomic | NC_000019.8:g.(?_2 10395)_(1903649_?) dup | NCBI36 (hg18) | NC_000019.8 | Chr19 | 210,395 | 1,903,649 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15132925 | GRCh37: NC_000019.9:g.(?_259395)_(1952649_?)dup, GRCh38: NC_000019.10:g.(?_259395)_(1952650_?)dup, NCBI36: NC_000019.8:g.(?_210395)_(1903649_?)dup | copy number gain | not provided | See cases | Pathogenic | ClinVar | RCV000052875.6, VCV000059078.1 | 3 |