nsv3927760
- Organism: Homo sapiens
- Study:nstd167 (Wenger et al. 2019)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:6,783
- Publication(s):Wenger et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 75 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 75 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3927760 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 106,135,421 | 106,142,203 |
| nsv3927760 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 107,056,578 | 107,063,360 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv15196146 | deletion | SAMN03283347 | Sequencing | de novo and local sequence assembly | Homozygous | 30,634 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15196146 | Remapped | Perfect | NC_000004.12:g.106 135421_106142203de l | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 106,135,421 | 106,142,203 |
| nssv15196146 | Submitted genomic | NC_000004.11:g.107 056578_107063360de l | GRCh37 (hg19) | NC_000004.11 | Chr4 | 107,056,578 | 107,063,360 |