nsv3957761
- Organism: Homo sapiens
- Study:nstd168 (Levy-Sakin et al. 2019)
- Variant Type:copy number variation
- Method Type:Optical mapping
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:214,827
- Publication(s):Levy-Sakin et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 817 SVs from 73 studies. See in: genome view
Overlapping variant regions from other studies: 817 SVs from 73 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3957761 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000003.12 | Chr3 | 161,977,841 | 162,192,667 | ||
nsv3957761 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 161,695,629 | 161,910,455 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv15218470 | deletion | Optical mapping | Optical mapping |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nssv15218470 | Submitted genomic | NC_000003.12:g.(16 1977841_?)_(?_1621 92667)del | GRCh38 (hg38) | NC_000003.12 | Chr3 | 161,977,841 | 162,192,667 | ||
nssv15218470 | Remapped | Perfect | NC_000003.11:g.(16 1695629_?)_(?_1619 10455)del | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 161,695,629 | 161,910,455 |