nsv3960199
- Organism: Homo sapiens
- Study:nstd168 (Levy-Sakin et al. 2019)
- Variant Type:insertion
- Method Type:Optical mapping
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:110,097
- Publication(s):Levy-Sakin et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1095 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 1095 SVs from 83 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3960199 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000003.12 | Chr3 | 197,363,816 | 197,473,912 | ||
| nsv3960199 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 197,090,687 | 197,200,783 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv15207245 | insertion | Optical mapping | Optical mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15207245 | Submitted genomic | NC_000003.12:g.(19 7363816_?)_(?_1974 73912)ins5896 | GRCh38 (hg38) | NC_000003.12 | Chr3 | 197,363,816 | 197,473,912 | ||
| nssv15207245 | Remapped | Perfect | NC_000003.11:g.(19 7090687_?)_(?_1972 00783)ins5896 | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 197,090,687 | 197,200,783 |