nsv3962841
- Organism: Homo sapiens
- Study:nstd168 (Levy-Sakin et al. 2019)
- Variant Type:copy number variation
- Method Type:Optical mapping
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:57,963
- Publication(s):Levy-Sakin et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 698 SVs from 80 studies. See in: genome view
Overlapping variant regions from other studies: 698 SVs from 80 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3962841 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000001.11 | Chr1 | 16,570,618 | 16,628,580 | ||
nsv3962841 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 16,897,113 | 16,955,075 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv15220839 | duplication | Optical mapping | Optical mapping |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nssv15220839 | Submitted genomic | NC_000001.11:g.(16 570618_?)_(?_16628 580)dup | GRCh38 (hg38) | NC_000001.11 | Chr1 | 16,570,618 | 16,628,580 | ||
nssv15220839 | Remapped | Perfect | NC_000001.10:g.(16 897113_?)_(?_16955 075)dup | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 16,897,113 | 16,955,075 |