nsv4039687
- Organism: Homo sapiens
- Study:nstd166 (gnomAD Structural Variants)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:544,310
- Publication(s):gnomAD_Structural_Variants
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 431 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 431 SVs from 18 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4039687 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 66,714,379 | 67,258,688 |
| nsv4039687 | Submitted genomic | GRCh37.p13 | Primary Assembly | NC_000023.10 | ChrX | 65,934,221 | 66,478,530 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv15989535 | duplication | Sequencing | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15989535 | Remapped | Perfect | NC_000023.11:g.667 14379_67258688dup | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 66,714,379 | 67,258,688 |
| nssv15989535 | Submitted genomic | NC_000023.10:g.659 34221_66478530dup | GRCh37.p13 | NC_000023.10 | ChrX | 65,934,221 | 66,478,530 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv15989535 | <0.001 | 6 | 21602 |