nsv4040186
- Organism: Homo sapiens
- Study:nstd166 (gnomAD Structural Variants)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:297,351
- Publication(s):gnomAD_Structural_Variants
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 276 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 277 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4040186 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 26,260,329 | 26,557,679 |
| nsv4040186 | Submitted genomic | GRCh37.p13 | Primary Assembly | NC_000023.10 | ChrX | 26,278,446 | 26,575,796 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv15987931 | duplication | Sequencing | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15987931 | Remapped | Perfect | NC_000023.11:g.262 60329_26557679dup | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 26,260,329 | 26,557,679 |
| nssv15987931 | Submitted genomic | NC_000023.10:g.262 78446_26575796dup | GRCh37.p13 | NC_000023.10 | ChrX | 26,278,446 | 26,575,796 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv15987931 | <0.001 | 4 | 21036 |