nsv41
- Organism: Homo sapiens
- Study:nstd1 (Tuzun et al. 2005)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:28,298
- Publication(s):Tuzun et al. 2005
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 615 SVs from 65 studies. See in: genome view
Overlapping variant regions from other studies: 644 SVs from 65 studies. See in: genome view
Overlapping variant regions from other studies: 11 SVs from 4 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv41 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 143,202,119 | 143,230,416 |
| nsv41 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 144,283,580 | 144,312,586 |
| nsv41 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000008.9 | Chr8 | 144,354,955 | 144,383,961 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv41 | insertion | SAMN00000376 | Sequencing | Paired-end mapping | 297 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv41 | Remapped | Good | NC_000008.11:g.(14 3202119_?)_(?_1432 30416)ins9386 | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 143,202,119 | 143,230,416 |
| nssv41 | Remapped | Perfect | NC_000008.10:g.(14 4283580_?)_(?_1443 12586)ins9386 | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 144,283,580 | 144,312,586 |
| nssv41 | Submitted genomic | NC_000008.9:g.(144 354955_?)_(?_14438 3961)ins9386 | NCBI35 (hg17) | NC_000008.9 | Chr8 | 144,354,955 | 144,383,961 |