nsv4106788
- Organism: Homo sapiens
- Study:nstd166 (gnomAD Structural Variants)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:17,151
- Publication(s):gnomAD_Structural_Variants
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 41 SVs from 7 studies. See in: genome view
Overlapping variant regions from other studies: 41 SVs from 7 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4106788 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 54,235,683 | 54,252,833 |
| nsv4106788 | Submitted genomic | GRCh37.p13 | Primary Assembly | NC_000004.11 | Chr4 | 55,101,850 | 55,119,000 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv15891044 | deletion | Sequencing | Other |
| nssv15974162 | duplication | Sequencing | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15891044 | Remapped | Perfect | NC_000004.12:g.542 35683_54252833del | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 54,235,683 | 54,252,833 |
| nssv15974162 | Remapped | Perfect | NC_000004.12:g.542 35683_54252833dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 54,235,683 | 54,252,833 |
| nssv15891044 | Submitted genomic | NC_000004.11:g.551 01850_55119000del | GRCh37.p13 | NC_000004.11 | Chr4 | 55,101,850 | 55,119,000 | ||
| nssv15974162 | Submitted genomic | NC_000004.11:g.551 01850_55119000dup | GRCh37.p13 | NC_000004.11 | Chr4 | 55,101,850 | 55,119,000 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv15891044 | <0.001 | 4 | 20836 |
| nssv15974162 | <0.001 | 5 | 21690 |