nsv4126852
- Organism: Homo sapiens
- Study:nstd166 (gnomAD Structural Variants)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:44,635
- Publication(s):gnomAD_Structural_Variants
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 68 SVs from 8 studies. See in: genome view
Overlapping variant regions from other studies: 3 SVs from 1 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 8 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4126852 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 162,439,233 | 162,483,867 |
| nsv4126852 | Remapped | Perfect | GRCh38.p12 | ALT_REF_LOCI_1 | Second Pass | NW_003315919.1 | Chr5|NW_00 3315919.1 | 63,259 | 107,893 |
| nsv4126852 | Submitted genomic | GRCh37.p13 | Primary Assembly | NC_000005.9 | Chr5 | 161,866,239 | 161,910,873 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv15977117 | duplication | Sequencing | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15977117 | Remapped | Perfect | NW_003315919.1:g.6 3259_107893dup | GRCh38.p12 | Second Pass | NW_003315919.1 | Chr5|NW_00 3315919.1 | 63,259 | 107,893 |
| nssv15977117 | Remapped | Perfect | NC_000005.10:g.162 439233_162483867du p | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 162,439,233 | 162,483,867 |
| nssv15977117 | Submitted genomic | NC_000005.9:g.1618 66239_161910873dup | GRCh37.p13 | NC_000005.9 | Chr5 | 161,866,239 | 161,910,873 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv15977117 | 4.6e-005 | 1 | 21694 |