nsv4239
- Organism: Homo sapiens
- Study:nstd2 (Kidd et al. 2008)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:58,063
- Publication(s):Kidd et al. 2008
- TRACE: TEMPLATE_ID='1205403_ABC13_11_000048821100_B19'
- TRACE: TEMPLATE_ID='1205403_ABC13_11_000048827500_F24'
- TRACE: TEMPLATE_ID='1205403_ABC13_11_000048827800_M24'
- TRACE: TEMPLATE_ID='171417_ABC10_2_1_000044442700_B15'
- TRACE: TEMPLATE_ID='173650_ABC10_2_1_000044490700_B19'
- Overlapping Genes
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 289 SVs from 44 studies. See in: genome view
Overlapping variant regions from other studies: 289 SVs from 44 studies. See in: genome view
Overlapping variant regions from other studies: 29 SVs from 2 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4239 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 13,564,336 | 13,622,398 |
| nsv4239 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 13,565,960 | 13,624,022 |
| nsv4239 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000004.9 | Chr4 | 13,242,229 | 13,300,291 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv4728 | Remapped | Perfect | NC_000004.12:g.(13 564336_?)_(?_13594 800)ins5731 | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 13,564,336 | 13,594,800 |
| nssv371 | Remapped | Perfect | NC_000004.12:g.(13 589327_?)_(?_13622 398)ins7916 | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 13,589,327 | 13,622,398 |
| nssv4728 | Remapped | Perfect | NC_000004.11:g.(13 565960_?)_(?_13596 424)ins5731 | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 13,565,960 | 13,596,424 |
| nssv371 | Remapped | Perfect | NC_000004.11:g.(13 590951_?)_(?_13624 022)ins7916 | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 13,590,951 | 13,624,022 |
| nssv4728 | Submitted genomic | NC_000004.9:g.(132 42229_?)_(?_132726 93)ins5731 | NCBI35 (hg17) | NC_000004.9 | Chr4 | 13,242,229 | 13,272,693 | ||
| nssv371 | Submitted genomic | NC_000004.9:g.(132 67220_?)_(?_133002 91)ins7916 | NCBI35 (hg17) | NC_000004.9 | Chr4 | 13,267,220 | 13,300,291 |