nsv428150
- Organism: Homo sapiens
- Study:nstd8 (Perry et al. 2008b)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:177,811
- Publication(s):Perry et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 620 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 620 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 162 SVs from 25 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv428150 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 92,699,750 | 92,877,560 |
| nsv428150 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 93,409,468 | 93,587,278 |
| nsv428150 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000006.10 | Chr6 | 93,466,189 | 93,643,999 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv450806 | copy number loss | HGDP01087 | BAC aCGH | Probe signal intensity | 75 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv450806 | Remapped | Perfect | NC_000006.12:g.(?_ 92699750)_(9287756 0_?)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 92,699,750 | 92,877,560 |
| nssv450806 | Remapped | Perfect | NC_000006.11:g.(?_ 93409468)_(9358727 8_?)del | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 93,409,468 | 93,587,278 |
| nssv450806 | Submitted genomic | NC_000006.10:g.(?_ 93466189)_(9364399 9_?)del | NCBI36 (hg18) | NC_000006.10 | Chr6 | 93,466,189 | 93,643,999 |