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dbVar

Database of genomic structural variation

nsv428192

Organism: Homo sapiens

Study:nstd8 (Perry et al. 2008b)
Variant Type:copy number variation
Method Type:BAC aCGH
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:126,829

Publication(s):Perry et al. 2008

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1235 SVs from 89 studies. See in: genome view

Remapped(Score: Good):159,205,837-159,332,665

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv428192	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	159,205,837	159,332,665
nsv428192	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	158,998,526	159,125,355
nsv428192	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000007.12	Chr7	158,691,287	158,818,116

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv451352	copy number loss	NA19113	BAC aCGH	Probe signal intensity	122
nssv451355	copy number loss	NA19189	BAC aCGH	Probe signal intensity	94

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv451352	Remapped	Good	NC_000007.14:g.(?_ 159205837)_(159332 665_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	159,205,837	159,332,665
nssv451355	Remapped	Good	NC_000007.14:g.(?_ 159205837)_(159332 665_?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	159,205,837	159,332,665
nssv451352	Remapped	Perfect	NC_000007.13:g.(?_ 158998526)_(159125 355_?)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	158,998,526	159,125,355
nssv451355	Remapped	Perfect	NC_000007.13:g.(?_ 158998526)_(159125 355_?)del	GRCh37.p13	First Pass	NC_000007.13	Chr7	158,998,526	159,125,355
nssv451352	Submitted genomic		NC_000007.12:g.(?_ 158691287)_(158818 116_?)del	NCBI36 (hg18)		NC_000007.12	Chr7	158,691,287	158,818,116
nssv451355	Submitted genomic		NC_000007.12:g.(?_ 158691287)_(158818 116_?)del	NCBI36 (hg18)		NC_000007.12	Chr7	158,691,287	158,818,116

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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