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dbVar

Database of genomic structural variation

nsv428205

Organism: Homo sapiens

Study:nstd8 (Perry et al. 2008b)
Variant Type:copy number variation
Method Type:BAC aCGH
Submitted on:NCBI36 (hg18)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:181,340

Publication(s):Perry et al. 2008

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 789 SVs from 68 studies. See in: genome view

Remapped(Score: Good):115,329,343-115,510,682

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv428205	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000008.11	Chr8	115,329,343	115,510,682
nsv428205	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000008.10	Chr8	116,341,572	116,522,909
nsv428205	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000008.9	Chr8	116,410,748	116,592,085

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv451582	copy number gain	HGDP00463	BAC aCGH	Probe signal intensity	90
nssv451583	copy number gain	HGDP00986	BAC aCGH	Probe signal intensity	82
nssv451584	copy number gain	HGDP01094	BAC aCGH	Probe signal intensity	92

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv451582	Remapped	Good	NC_000008.11:g.(?_ 115329343)_(115510 682_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	115,329,343	115,510,682
nssv451583	Remapped	Good	NC_000008.11:g.(?_ 115329343)_(115510 682_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	115,329,343	115,510,682
nssv451584	Remapped	Good	NC_000008.11:g.(?_ 115329343)_(115510 682_?)dup	GRCh38.p12	First Pass	NC_000008.11	Chr8	115,329,343	115,510,682
nssv451582	Remapped	Perfect	NC_000008.10:g.(?_ 116341572)_(116522 909_?)dup	GRCh37.p13	First Pass	NC_000008.10	Chr8	116,341,572	116,522,909
nssv451583	Remapped	Perfect	NC_000008.10:g.(?_ 116341572)_(116522 909_?)dup	GRCh37.p13	First Pass	NC_000008.10	Chr8	116,341,572	116,522,909
nssv451584	Remapped	Perfect	NC_000008.10:g.(?_ 116341572)_(116522 909_?)dup	GRCh37.p13	First Pass	NC_000008.10	Chr8	116,341,572	116,522,909
nssv451582	Submitted genomic		NC_000008.9:g.(?_1 16410748)_(1165920 85_?)dup	NCBI36 (hg18)		NC_000008.9	Chr8	116,410,748	116,592,085
nssv451583	Submitted genomic		NC_000008.9:g.(?_1 16410748)_(1165920 85_?)dup	NCBI36 (hg18)		NC_000008.9	Chr8	116,410,748	116,592,085
nssv451584	Submitted genomic		NC_000008.9:g.(?_1 16410748)_(1165920 85_?)dup	NCBI36 (hg18)		NC_000008.9	Chr8	116,410,748	116,592,085

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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