nsv428209
- Organism: Homo sapiens
- Study:nstd8 (Perry et al. 2008b)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:176,645
- Publication(s):Perry et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2894 SVs from 96 studies. See in: genome view
Overlapping variant regions from other studies: 2898 SVs from 96 studies. See in: genome view
Overlapping variant regions from other studies: 961 SVs from 28 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv428209 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 11,998,111 | 12,174,755 |
nsv428209 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 11,998,111 | 12,174,755 |
nsv428209 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000009.10 | Chr9 | 11,988,111 | 12,164,755 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv451646 | copy number loss | HGDP00476 | BAC aCGH | Probe signal intensity | 69 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv451646 | Remapped | Perfect | NC_000009.12:g.(?_ 11998111)_(1217475 5_?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 11,998,111 | 12,174,755 |
nssv451646 | Remapped | Perfect | NC_000009.11:g.(?_ 11998111)_(1217475 5_?)del | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 11,998,111 | 12,174,755 |
nssv451646 | Submitted genomic | NC_000009.10:g.(?_ 11988111)_(1216475 5_?)del | NCBI36 (hg18) | NC_000009.10 | Chr9 | 11,988,111 | 12,164,755 |