nsv429572
- Organism: Homo sapiens
- Study:nstd11 (Walter et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:170,592,257
- Publication(s):Walter et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 463546 SVs from 157 studies. See in: genome view
Overlapping variant regions from other studies: 461912 SVs from 157 studies. See in: genome view
Overlapping variant regions from other studies: 142367 SVs from 48 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv429572 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 149,661 | 170,741,917 |
| nsv429572 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 149,661 | 171,051,005 |
| nsv429572 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000006.10 | Chr6 | 94,661 | 170,892,930 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|
| nssv459358 | copy number gain | SNP array | SNP genotyping analysis | Leukemia, Myeloid, Acute | not provided | Submitter |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv459358 | Remapped | Good | NC_000006.12:g.(?_ 149661)_(170741917 _?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 149,661 | 170,741,917 |
| nssv459358 | Remapped | Good | NC_000006.11:g.(?_ 149661)_(171051005 _?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 149,661 | 171,051,005 |
| nssv459358 | Submitted genomic | NC_000006.10:g.(?_ 94661)_(170892930_ ?)dup | NCBI36 (hg18) | NC_000006.10 | Chr6 | 94,661 | 170,892,930 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|
| nssv459358 | NCBI36: NC_000006.10:g.(?_94661)_(170892930_?)dup | copy number gain | somatic | Leukemia, Myeloid, Acute | not provided | Submitter |