nsv429610
- Organism: Homo sapiens
- Study:nstd11 (Walter et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:42,597,746
- Publication(s):Walter et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 139514 SVs from 151 studies. See in: genome view
Overlapping variant regions from other studies: 139517 SVs from 151 studies. See in: genome view
Overlapping variant regions from other studies: 48194 SVs from 46 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv429610 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 165,632 | 42,763,377 |
| nsv429610 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 165,632 | 42,731,115 |
| nsv429610 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000006.10 | Chr6 | 110,632 | 42,839,093 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|
| nssv459396 | copy-neutral loss of heterozygosity | SNP array | SNP genotyping analysis | Leukemia, Myeloid, Acute | not provided | Submitter |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv459396 | Remapped | Good | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 165,632 | 42,763,377 | |
| nssv459396 | Remapped | Good | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 165,632 | 42,731,115 | |
| nssv459396 | Submitted genomic | NC_000006.10:g.(?_ 110632)_(42839093_ ?)del | NCBI36 (hg18) | NC_000006.10 | Chr6 | 110,632 | 42,839,093 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|
| nssv459396 | NCBI36: NC_000006.10:g.(?_110632)_(42839093_?)del | copy-neutral loss of heterozygosity | somatic | Leukemia, Myeloid, Acute | not provided | Submitter |