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dbVar

Database of genomic structural variation

nsv429614

Organism: Homo sapiens

Study:nstd11 (Walter et al. 2009)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:35,656

Publication(s):Walter et al. 2009

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 164 SVs from 30 studies. See in: genome view

Remapped(Score: Perfect):118,444,731-118,480,386

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv429614	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	118,444,731	118,480,386
nsv429614	Remapped	Perfect	GRCh37.p13	Primary Assembly	Second Pass	NC_000011.9	Chr11	118,315,446	118,351,101
nsv429614	Remapped	Perfect	GRCh37.p13	PATCHES	First Pass	NW_003871072.2	Chr11\|NW_0 03871072.2	70,169	105,824
nsv429614	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000011.8	Chr11	117,820,656	117,856,311

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation
nssv459400	copy number gain	SNP array	SNP genotyping analysis	Leukemia, Myeloid, Acute	not provided	Submitter

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv459400	Remapped	Perfect	NC_000011.10:g.(?_ 118444731)_(118480 386_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	118,444,731	118,480,386
nssv459400	Remapped	Perfect	NW_003871072.2:g.( ?_70169)_(105824_? )dup	GRCh37.p13	First Pass	NW_003871072.2	Chr11\|NW_0 03871072.2	70,169	105,824
nssv459400	Remapped	Perfect	NC_000011.9:g.(?_1 18315446)_(1183511 01_?)dup	GRCh37.p13	Second Pass	NC_000011.9	Chr11	118,315,446	118,351,101
nssv459400	Submitted genomic		NC_000011.8:g.(?_1 17820656)_(1178563 11_?)dup	NCBI36 (hg18)		NC_000011.8	Chr11	117,820,656	117,856,311

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation
nssv459400	NCBI36: NC_000011.8:g.(?_117820656)_(117856311_?)dup	copy number gain	somatic	Leukemia, Myeloid, Acute	not provided	Submitter

No genotype data were submitted for this variant

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