nsv429616
- Organism: Homo sapiens
- Study:nstd11 (Walter et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:94,396,169
- Publication(s):Walter et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 258892 SVs from 154 studies. See in: genome view
Overlapping variant regions from other studies: 258819 SVs from 154 studies. See in: genome view
Overlapping variant regions from other studies: 78820 SVs from 44 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv429616 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000013.11 | Chr13 | 19,914,072 | 114,310,240 |
| nsv429616 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000013.10 | Chr13 | 20,488,212 | 115,075,715 |
| nsv429616 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000013.9 | Chr13 | 19,386,212 | 114,093,817 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|
| nssv459402 | copy-neutral loss of heterozygosity | SNP array | SNP genotyping analysis | Leukemia, Myeloid, Acute | not provided | Submitter |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv459402 | Remapped | Good | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 19,914,072 | 114,310,240 | |
| nssv459402 | Remapped | Good | GRCh37.p13 | First Pass | NC_000013.10 | Chr13 | 20,488,212 | 115,075,715 | |
| nssv459402 | Submitted genomic | NC_000013.9:g.(?_1 9386212)_(11409381 7_?)del | NCBI36 (hg18) | NC_000013.9 | Chr13 | 19,386,212 | 114,093,817 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|
| nssv459402 | NCBI36: NC_000013.9:g.(?_19386212)_(114093817_?)del | copy-neutral loss of heterozygosity | somatic | Leukemia, Myeloid, Acute | not provided | Submitter |