nsv429619
- Organism: Homo sapiens
- Study:nstd11 (Walter et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:11,332,614
- Publication(s):Walter et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 47208 SVs from 143 studies. See in: genome view
Overlapping variant regions from other studies: 47215 SVs from 143 studies. See in: genome view
Overlapping variant regions from other studies: 13593 SVs from 43 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv429619 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 64,537 | 11,397,150 |
| nsv429619 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 114,535 | 11,491,007 |
| nsv429619 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000016.8 | Chr16 | 54,535 | 11,398,508 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|
| nssv459405 | copy-neutral loss of heterozygosity | SNP array | SNP genotyping analysis | Leukemia, Myeloid, Acute | not provided | Submitter |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv459405 | Remapped | Good | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 64,537 | 11,397,150 | |
| nssv459405 | Remapped | Good | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 114,535 | 11,491,007 | |
| nssv459405 | Submitted genomic | NC_000016.8:g.(?_5 4535)_(11398508_?) del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 54,535 | 11,398,508 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation |
|---|---|---|---|---|---|---|
| nssv459405 | NCBI36: NC_000016.8:g.(?_54535)_(11398508_?)del | copy-neutral loss of heterozygosity | somatic | Leukemia, Myeloid, Acute | not provided | Submitter |